DVD movie sets have each of the DVDs in them listed. The latest editions are bolded.

DVD

24 season 2

24 season 3

24 season 4

24 season 5

24 season 6

A Dog’s Breakfast
Field of Dreams
Finding Nemo
Godspell
Hitch
Hook
Left Behind II: Tribulation Force
Matrix
National Treasure
Over the Hedge
Pirates of the Caribbean: Dead Man's Chest:
Disc 1: Pirates of the Caribbean: Dead Man's Chest
Disc 2: Bonus Material

Pirates of the Caribbean: The Curse of the Black Pearl:

Disc 1: Pirates of the Caribbean: The Curse of the Black Pearl

Disc 2: Bonus Material
Santa Clause 2

Shrek 2
Simon Birch
Sleepless in Seattle

Stargate

Stargate: The Ark of Truth

Stargate Atlantis season 1 (thin boxset)
Stargate Atlantis season 2 (thin boxset)

Stargate Atlantis season 3 (thin boxset)

Stargate SG-1 – The Complete Series Collection
Stargate SG-1 season 1 (wide boxset)
Stargate SG-1 season 2 (wide boxset)
Stargate SG-1 season 3 (wide boxset)
Stargate SG-1 season 4 (wide boxset)
Stargate SG-1 season 5 (wide boxset)
Stargate SG-1 season 6 (wide boxset)
Stargate SG-1 season 7 (wide boxset)
Stargate SG-1 season 8 (wide boxset)
Stranger than Fiction
The Chronicles of Narnia: The Lion, the Witch, and the Wardrobe:
Disc 1: Extended Motion Picture with Additional Scenes
Disc 2: Two Worlds of Narnia
Disc 3: C.S. Lewis – Dreamer of Narnia
Disc 4: Visualizing The Lion, the Witch, and the Wardrobe: The Complete Production Experience
The Man Without a Face
The Sisterhood of the Traveling Pants

The Sound of Music (40^th Anniversary Edition):

Disc 1: The Sound of Music (plus Bonus Material)

Disc 2: Bonus Material

Toy Story (10^th Anniversary Edition; 2 Disc Set):

Disc 1: Toy Story (plus Bonus Material)

Disc 2: Bonus Material

Toy Story 2 (2-Disc Special Edition):

Disc 1: Toy Story 2 (plus Bonus Material)

Disc 2: Bonus Material
VeggieTales: A Snoodle's Tale
VeggieTales: Minnesota Cuke and the Search for Samson's Hairbrush
With Honors
World Trade Center (commemorative edition):
Disc 1: Feature Film
Disc 2: Special Features
Bonus Disc: In Their Own Words: 27 Interviews

VHS (Movies crossed out are ones that I've bought on DVD since getting them on VHS)
A Bug's Life
A Charlie Brown Christmas
A Walk to Remember
Aladdin
Annie (it's a remake, not the original)
At First Sight
Dave
Fly Away Home
Forrest Gump
Fried Green Tomatoes
Free Willy
Frequency
Good Morning Vietnam
It's a Wonderful Life
Jesus
Jumanji
Left Behind: The Movie
Liar Liar
Mark Lowry: My First Comedy Video
Mark Lowry: Mouth in Motion
Mark Lowry: On Broadway
Mark Lowry: Remotely Controlled
Miss Congeniality
Monsters, Inc.
Monty Python's Parrot Sketch Not Included
Monty Python and the Holy Grail
Monty Python's Flying Circus
Mrs. Doubtfire
My Best Friend's Wedding
My Life
Mystery Science Theater Shorts
Patch Adams
Phenomenon
Pinocchio
Snow White and the Seven Dwarfs
The Lion King
The Little Mermaid
The Mighty Ducks: D3
The Santa Clause
The Sixth Sense
The Wizard of Oz
Toy Story
VeggieTales: A Very Silly Sing-Along
VeggieTales: Josh and the Big Wall!
VeggieTales: Larry-Boy and the Fib from Outer Space!
VeggieTales: Larry-Boy and the Rumor Weed

Taped off TV onto VHS (Movies crossed out are ones that I've bought since recording them off TV.)
A Christmas Story
A Father for Brittany
A Little Princess
A River Runs Through It
A Walk in the Clouds
After the Promise
Andre
Awakenings
Back to the Future I
Back to the Future II
Back to the Future III

Charlie and the Chocolate Factory
Conspiracy Theory
Dead Poets Society
Dear God
Disaster in Time
Door to Door

Flight 93

Forever Young
Ghostbusters
Good Will Hunting
Grease
Groundhog's Day

In Good Company

Indiana Jones and the Last Crusade

Indiana Jones and the Temple of Doom
Judicial Indiscression

Kim Possible: A Stitch in Time
Lilo and Stitch
Lilo and Stitch 2: Stitch Has a Glitch

Mary Poppins
Maverick
Mercury Rising
Milo and Otis
Miracle in Lane 2
Miracle on 34th Street (the orignal)
My Fellow Americans
My Girl
Mystery Science Theater 3000 the Movie
Oh God! Book II
One Fine Day
Pandora's Clock
Pay it Forward
Places in the Heart

Raiders of the Lost Ark
Rain Man
Regarding Henry

Remember the Titans
Rudy

Shrek
Sixteen Candles
Space Jam
Speechless
Speed

Star Wars: Episode I – The Phantom Menace

Star Wars: Episode II – Attack of the Clones

Star Wars: Episode III – Revenge of the Sith

Star Wars: Episode IV – A New Hope

Star Wars: Episode V – The Empire Strikes Back

Star Wars: Episode VI – Return of the Jedi
Stargate

Stargate Atlantis season 4
The Beniker Gang
The Emperor's New Groove
The Kid
The Librarian: Quest for the Spear
The Librarian: Return to King Solomon's Mines
The Man Without a Face
The Net
The Never Ending Story

The Rookie

Tiger Cruise
Tommy Boy
Toy Story II
Tru Confessions
True Lies
Under the Mistletoe
What Love Sees
With Honors